PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G127700.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 316aa    MW: 33908.1 Da    PI: 6.7127
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G127700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.11.6e-13109156455
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h   Er RR+++++ f++L  llP++     +K +K++i+ +Av+YIk Lq
  Prupe.8G127700.1.p 109 MHIWTERERRKKMRNMFANLHALLPQL----PPKADKSTIVDEAVNYIKTLQ 156
                         56678*********************6....39******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.83E-16104173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.005105155IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.48E-11108152No hitNo description
Gene3DG3DSA:4.10.280.101.1E-15108167IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.2E-11110156IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-9113161IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048732.46E-4240297No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MSEGETGGFS EGFLWENQSW ANLSINSDNS GGAGDEDKNF GTKEETAVMG ISTEGHNQVP  60
PAPGKKRRGG GGVGKNGIIK GSTSPADKGK GTTGARDGGG GGESDDHEMH IWTERERRKK  120
MRNMFANLHA LLPQLPPKAD KSTIVDEAVN YIKTLQQTLQ KLQKQKLERL QGATTINFDP  180
SILNPQNVAF GSREEFLANH GSAATINPSN SLLTSHCGPV NFQTWTTPNV VLNICGDEAQ  240
ISVCCPKKAG LLSAICFVLE KYKLGVMSAH VSSDCNRSMY MIQAHARGAP DQFLDTFPAD  300
EIFKQAAAEI ILMLS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007199265.10.0hypothetical protein PRUPE_ppa022683mg
TrEMBLM5VHD60.0M5VHD6_PRUPE; Uncharacterized protein
STRINGVIT_03s0063g00170.t011e-119(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47733358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.13e-46bHLH family protein